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Below are two example Variant Call Format (VCF) files. The first contains genotypes and the second contains a mixture of genotypes and dosages. Each has 4 samples

Low ~ 5th percentile
Med ~ 50th percentile
Mod ~ 75th percentile
High ~ 95th percentile
  1. 'sample_BCAC_313_genotypes.vcf' - A sample file for the BCAC 313 variant PRS using genotypes only, with samples 'Low', 'Med', 'Mod' and 'High' corresponding to roughly 5%, 50%, 75% and 95% PRS percentiles respectively.      

    View file
    namesample_BCAC_313_genotypes.txt
    height250



  2. 'sample_BCAC_313_dosages.vcf' - A sample file for the BCAC 313 variant PRS using a combination of genotypes and dosages, with samples 'Low', 'Med', 'Mod' and 'High' corresponding to roughly 5%, 50%, 75% and 95% PRS percentiles respectively.

    View file
    namesample_BCAC_313_dosages.
vcf
  1. txt
    height250
                         



  1. 'sample_BCAC_313.vcf' - A sample file for the BCAC 313 variant PRS using a combination of genotypes and dosages, with samples '0.01', '0.025', '0.05', '0.1', '0.2', '0.3', '0.4', '0.5', '0.6', '0.7', '0.8', '0.9', '0.95', '0.975', '0.99' corresponding to roughly 1%, 2.5%, 5%, 10%, 20%, 30%, 40%, 50%, 60%, 70%, 80%, 90%, 95%, 97.5% and 99% PRS percentiles respectively.

    View file
    namesample_BCAC_313
_dosages
  1. .
vcf
  1. txt
    height250


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