alpha = 0.350
Chromosome,Position,Reference_Allele,Effect_Allele,Effect_Allele_Frequency,Log_Odds_Ratio
1,10566215,A,G,0.33,-0.06005906
1,114448389,C,T,0.16,0.07791985
1,121280613,A,G,0.4,0.0946761
1,202187176,G,A,0.41,-0.0111072
1,204518842,C,A,0.26,0.02867582
2,19320803,T,C,0.36,0.03798681
2,121245122,T,C,0.1,-0.08478269
2,172972971,G,A,0.48,-0.05087545
2,174212894,G,A,0.16,-0.0570808
2,202149589,G,C,0.13,-0.03620418
2,217905832,A,G,0.49,-0.12677623
2,218296508,C,T,0.26,0.06579368
3,4742276,A,G,0.4,0.06405226
3,27416013,C,T,0.47,0.08962429
3,30682939,G,C,0.34,0.0515878
4,106084778,C,T,0.22,0.04694756
4,175846426,C,A,0.12,-0.09917876
5,1279790,C,T,0.26,0.05713264
5,1282319,C,A,0.34,0.04321036
5,1297488,C,T,0.29,-0.06273883
5,44706498,A,G,0.25,0.11312653
5,56031884,C,A,0.28,0.11119666
5,58184061,T,C,0.38,0.04100685
5,58337481,T,G,0.1,-0.08195236
5,158244083,C,T,0.43,0.06480503
6,1318878,C,T,0.39,-0.0587906
6,13722523,G,A,0.44,0.0490767
6,82128386,T,C,0.22,0.04469056
6,151918856,T,G,0.07,0.15940854
6,151948366,G,A,0.34,0.07234768
7,144074929,G,A,0.25,-0.0563511
8,29509616,A,C,0.32,0.07049028
8,76230301,G,T,0.18,-0.09164423
8,76417937,A,G,0.07,0.12517972
8,128355618,A,G,0.41,0.09079677
8,129194641,C,T,0.16,0.0668576
9,22062134,G,T,0.17,0.04895944
9,110306115,C,A,0.29,0.05448296
9,110888478,G,T,0.38,-0.10763348
10,5886734,C,T,0.44,-0.0231231
10,22032942,A,G,0.29,0.06895096
10,22315843,A,C,0.02,0.23099464
10,64278682,G,A,0.16,-0.15519266
10,80841148,T,C,0.38,0.06760605
10,114773927,A,G,0.46,0.05676472
10,123093901,C,T,0.32,-0.05383094
10,123337335,A,G,0.4,0.22301663
11,1909006,T,C,0.31,0.07173574
11,65583066,G,T,0.47,-0.05746458
11,69331418,C,T,0.06,0.29247596
11,69331642,C,G,0.12,0.23130216
11,69379161,C,A,0.06,0.26779033
11,129461171,T,C,0.41,-0.04470047
12,14413931,G,C,0.26,0.03215241
12,28155080,A,G,0.12,-0.14744134
12,96027759,A,G,0.3,-0.09676341
12,115836522,A,G,0.42,-0.08127596
13,32972626,A,T,0.01,0.23180143
14,37132769,G,A,0.21,-0.08302005
14,68660428,T,C,0.16,0.07329224
14,69034682,C,T,0.23,-0.08484094
14,91841069,A,G,0.34,0.06167354
16,52586341,A,G,0.26,0.20351
16,53813367,T,G,0.4,-0.07258951
16,53855291,A,T,0.24,0.03609589
16,80650805,A,G,0.22,0.07308737
17,53056471,G,A,0.28,-0.06830462
18,24337424,C,G,0.38,-0.04363588
18,24570667,T,G,0.4,-0.05485949
19,17389704,G,A,0.19,0.0309064
19,17394124,T,G,0.49,0.02607352
19,18571141,A,G,0.35,-0.06733457
19,44286513,A,G,0.46,0.05386353
21,16520832,G,A,0.27,-0.07538833
22,29121087,A,G,0,0.30979947
22,29621477,C,T,0.04,0.10354398
22,40876234,T,C,0.11,0.12616136